Carrot Cake Cupcakes

Featured in Sweet Treats to Satisfy Any Craving.

Cupcakes with carrot & cheesecake layers. Ready in 50 mins plus cooling. Makes 12 servings.
Barbara Chef
Updated on Tue, 25 Mar 2025 17:08:27 GMT
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Carrot Cake Cheesecake Cupcakes | cookwithcarla.com

These amazing cupcakes merge two favorite sweets - soft carrot cake with smooth cheesecake on top and cream cheese frosting to finish. They've got awesome texture and taste that'll wow anyone.

When I made these for my kid's party, I found out that giving the cheesecake part plenty of time to cool makes everything taste just right together.

Key Components:

  • Fresh carrots: Grate them by hand
  • Cream cheese: Let it sit out for best mixing
  • Cake flour: Makes everything soft
  • Spices: Cinnamon, nutmeg for flavor
  • Vegetable oil: Keeps everything juicy
  • Eggs: Not cold for easier blending
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Carrot Cake Cheesecake Cupcakes Recipes | cookwithcarla.com

Step-by-Step Guide:

Put Together Cheesecake Top
Whip room temp cream cheese until fluffy
Pour sugar in bit by bit
Stir in egg and vanilla
Get rid of all bumps
Create Carrot Cake Bottom
Mix all wet stuff together
Stir dry things in another bowl
Add hand-grated carrots
Stir just enough
Stack Everything Up
Put cake mix in liners about 2/3 full
Spoon cheesecake stuff on top
Keep space for everything to grow
Use spoon to even out tops
Cook and Rest
Look after 20 mins
Cheesecake part shouldn't jiggle
Let them cool all the way
Let them cool all the way
Wait at least 8 hours in fridge
Wait at least 8 hours in fridge

I found out that waiting long enough makes these cupcakes taste way better and gives them just the right feel when you bite into them.

Keeping Them Fresh:

Store in the fridge for about 5 days. You can freeze them without frosting for up to 2 months.

Topping Ideas:

Regular cream cheese frosting works great, but you can try whipped cream if you want something not so heavy.

When To Serve:

These work great at morning parties, baby showers, or any special event.

Easy Carrot Cake Cheesecake Cupcakes Recipe Pin it
Easy Carrot Cake Cheesecake Cupcakes Recipe | cookwithcarla.com

Pro Advice:

  • Check if cake part is done
  • Use new spices for stronger taste
  • Cover any dips with extra frosting

I've been making these cupcakes for ages now, and I've learned that taking your time with cooling and using ingredients at the right temperature always gets the best results.

Frequently Asked Questions

→ Why use ingredients at room temp?
Keeps cheesecake smooth without lumps.
→ Can I make bite-sized ones?
Sure, yields about 48 minis. Shorten baking time.
→ Why does the cheesecake dip in the center?
It naturally sinks. Just load it up with frosting!
→ How long does it keep?
Store in the fridge for 3 days or freeze without frosting for a month.
→ Can I leave out the nuts?
Totally, nuts are optional for the carrot cake base.

Carrot Cheesecake Cups

Cupcakes with cheesecake on top and carrot cake at the bottom. Finished off with smooth cream cheese frosting.

Prep Time
30 Minutes
Cook Time
20 Minutes
Total Time
50 Minutes

Category: Desserts

Difficulty: Intermediate

Cuisine: American

Yield: 12 Servings (12 cupcakes)

Dietary: Vegetarian

Ingredients

→ Cake Mixture

01 Grated carrots
02 Plain flour
03 Egg, large
04 Oil for cooking
05 Unsweetened applesauce
06 Brown sugar and white sugar mix
07 Vanilla essence
08 Ground cinnamon
09 Optional nut pieces
10 Baking powder and soda

→ Cheesecake Filling

11 Cream cheese (softened)
12 Sour cream (room temperature)
13 Granulated sugar
14 Egg (room temperature)
15 Vanilla flavoring

→ Topping

16 Cream cheese, soft
17 Butter at room temperature
18 Icing sugar
19 Vanilla for taste

Instructions

Step 01

Turn the oven on to 350°F, and line your muffin tray with paper liners.

Step 02

Combine wet stuff, toss in the dry bits, then fold in carrots and any nuts you like.

Step 03

Blend all cheesecake items until totally creamy.

Step 04

Spoon the cake mix in first, then layer the cheesecake mix on top.

Step 05

Bake for 18-25 minutes. Let them cool, then refrigerate.

Step 06

Whip frosting ingredients together, then swirl it onto the cupcakes.

Notes

  1. Best results come from room temperature ingredients.
  2. Expect the cheesecake to sink a little.
  3. Cool them down in the fridge before serving.

Tools You'll Need

  • Tray for muffins
  • Electric hand mixer
  • Bag with star piping tip

Allergy Information

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Includes dairy
  • Includes eggs
  • Made with wheat
  • May include nuts (optional)

Nutrition Facts (Per Serving)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 410
  • Total Fat: 23 g
  • Total Carbohydrate: 49 g
  • Protein: 3 g